Publications

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2017

No publications registred for this year.


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2016

No publications registred for this year.


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2015

No publications registred for this year.


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2014

No publications registred for this year.


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2013

No publications registred for this year.


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2012

  1. Austarheim, I., Christensen, B.E., Hegna, I.K., Petersen, B.O., Duus, J.O., Bye, R., Michaelsen, T.E., Diallo, D., Inngjerdingen, M., and Paulsen, B.S. Chemical and biological characterization of pectin-like polysaccharides from the bark of the Malian medicinal tree Cola cordifolia Carbohydrate Polymers 89 1 259-268 2012

  2. Dalsgaard, P.W., Petersen, B.O., Duus, J.Ø, Zidorn, C., Frisvad, J.C., Christophersen, C., and Larsen, T.O. Atlantinone A, a Meroterpenoid Produced by Penicillium ribeum and Several Cheese Associated Penicillium Species Metabolites 2 1 214-220 2012

  3. Hansen, D.F., Westler, W.M., Kunze, M.B.A., Markley, J.L., Weinhold, F., and Led, J.J. Accurate Structure and Dynamics of the Metal-Site of Paramagnetic Metalloproteins from NMR Parameters Using Natural Bond Orbitals Journal of the American Chemical Society 134 10 4670-4682 2012

  4. Holler, J.G., Christensen, S.B., Slotved, H.C., Rasmussen, H.B., Guzman, A., Olsen, C., Petersen, B., and Mølgaard, P. Novel inhibitory activity of the Staphylococcus aureus NorA efflux pump by a kaempferol rhamnoside isolated from Persea lingue Nees Journal of Antimicrobial Chemotherapy 2012

  5. Karlsson, M., Jensen, P., Duus, J., Meier, S., and Lerche, M.H. Development of Dissolution DNP-MR Substrates for Metabolic Research Applied Magnetic Resonance 1-14 2012

  6. Meier, S., Jensen, P.R., and Duus, J.Ø Direct Observation of Metabolic Differences in Living Escherichia Coli Strains K-12 and BL21 ChemBioChem 13 2 308-310 2012

  7. Petersen, B.O., Meier, S., and Duus, J.Ø. NMR assignment of structural motifs in intact b-limit dextrin and its a-amylase degradation products in situ Carbohydrate Research 0 2012


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2011

  1. Larsen, T, Petersen, B.O., Storgaard, B.G., Duus, J.Ø, Palcic, M.M., and Leisner, J.J. Characterization of a novel Salmonella Typhimurium chitinase which hydrolyzes chitin, chitooligosaccharides and an N-acetyllactosamine conjugate Glycobiology 21 4 426-436 2011

  2. Lerche, M.H., Meier, S., Jensen, P.R., Hustvedt, S.O., Karlsson, M., Duus, J.Ø., and Ardenkjær-Larsen, Jan H. Quantitative dynamic nuclear polarization-NMR on blood plasma for assays of drug metabolism NMR in Biomedicine 24 1 96-103 2011

  3. Meier, S. and Duus, J. Carbohydrate dynamics: Antibody glycans wiggle and jiggle Nat Chem Biol 7 3 131-132 2011

  4. Meier, S., Jensen, P.R., and Duus, J.Ø Real-time detection of central carbon metabolism in living Escherichia coli and its response to perturbations FEBS Letters 585 19 3133-3138 2011

  5. Meier, S., Karlsson, M., Jensen, P.R., Lerche, M.H., and Duus, J.O. Metabolic pathway visualization in living yeast by DNP-NMR Molecular BioSystems 7 10 2834-2836 2011

  6. Vinther, J.M., Kristensen, S.M., and Led, J.J. Enhanced Stability of a Protein with Increasing Temperature Journal of the American Chemical Society 133 2 271-278 2011


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2010

  1. Adlercreutz, D., Weadge, J.T., Petersen, B.O., Duus, J.Ø., Dovichi, N.J., and Palcic, M. Enzymatic synthesis of Gb3 and iGb3 ceramides Carbohydrate Research 345 1384-1388 2010

  2. Bek, A.J., Sauer, J., Thygesen, M.B., Duus, J.Ø., Petersen, B.O., Thirup, S., James, E., Jensen, K.J., Stougaard, J., and Radutoiu, S. Improved Characterization of Nod Factors and Genetically Based Variation in LysM Receptor Domains Identify Amino Acids Expendable for Nod Factor Recognition in Lotus spp. Mol.Plant-Micro.Interact. 23 58-66 2010

  3. Malmendal, A., Underhaug, J., Otzen, D.E., and Nielsen, N.C. Fast Mapping of Global Protein Folding States by Multivariate NMR. A GPS for Proteins PloS One 5 0 2010

  4. Månsson, M., Klejnstrup, M.L., Phipps, R.K., Nielsen, K.F., Frisvad, J.C., Gotfredsen, C.H., and Larsen, T.O. Isolation and NMR characterization of Fumonisin B2 and a New Fumonisin B6 from Aspergillus niger J.Agric.Food.Chem. 58 949-953 2010

  5. Schneider, T., Kruse, T., Wimmer, R., Weidemann, I., Sass, V., Pag, U., Jansen, A., Nielsen, A.K., Mygind, P.H., Raventos, D.S., Neve, S., Ravn, B., Bonvin, A.M.J.J., De Maria, L., Andersen, A.S., Gammelgaard, L.K., Sahl, H.-G., and Kristensen, H.-H. Plectasin, a Fungal Defensin, Targets the Bacterial Cell Wall Precursor Lipid II Science 328 1168-1172 2010

  6. Straadt, I.K., Young, J.F., Petersen, B.O., Duus, J.Ø., Gregersen, N., Bross, P., Oksbjerg, N., and Bertram, H.C. Metabolic profiling of heat or anoxic stress in mouse C2C12 myotubes using multinuclear magnetic resonance spectroscopy Metabolism Clin.Exp. 59 814-823 2010

  7. Vad, B.S., Thomsen, L.A., Bertelsen, K., Franzmann, M., Pedersen, J.M., Nielsen, S.B., Vosegaard, T., Valnickova, Z., Skrydstrup, T., Enghild, J.J., Wimmer, R., Nielsen, N.C., and Otzen, D.E. Divorcing Folding from Function. How Acylation Affects of the Membrane-pertubing Properties of an Antomicrobial Peptide Biochem.Biophys.Acta 1804 806-820 2010

  8. Zidorn.C., Petersen, B.O., Sareedenchai, V., Ellmerer, E.P., and Duus, J.Ø. Tragoponol, a dimeric dihydroisocoumarin from Tragopogon porrifolius L. Tetrahedron Lett. 1390-1393 2010


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2009

  1. Bertram, H.C., Duus, J.Ø., Petersen, B.O., Hoppe, C., Larnkjær, A., Schack-Nielsen, L., Mølgaard, C., and Michaelsen, K.F. Nuclear magentic resonance-based metabonomics reveals strong sex effect on plasma metabolism in 17-year-old Scandinavians and correlation to retroscpective infant plasma parameters Metabolism Clin.Exp. 58 1039-1045 2009

  2. Bertram, H.C., Petersen, B.O., Duus, J.Ø., Larsen, M., Raun, B.M.L., and Kristensen, N.B. Proton nuclear magnetic resonance spectroscopy based investigation on propylene glycol toxicosis in a Holstein cow Acta Vet.Scand. 51 25 2009

  3. Hass, M.A.S., Vlasie, M.D., Ubbink, M., and Led, J.J. Conformational Exchange in Pseudoazurin:Different Kins of Microsecond o Millisecond Dynamics Characterized by Their pH and Buffer Dependence Using N NMR Relaxation Biochemistry 48 50-58 2009

  4. Meier, S., Benie, A.J., Duus, J.Ø., and Sørensen, O.W. 3D H2BC: A novel experiment for small-molecule and biomelcular NMR at natural isotopic abundance Journal of Magnetic Resonance 200 340-343 2009

  5. Meier, S., Petersen, B.O., Duus, J.Ø., and Sørensen, O.W. Recent progress in heteronuclear long-range NMR of complex carbohydrates: 3D H2BC and clean HMBC Carbohydrate Research 344 2274-2278 2009

  6. Nielsen, J.T, Arar, K., and Petersen, M. Solution structure of a locked nucleic acid modified quadruplex: Introducing the V4 folding topology Angew.Chem.Int.Ed. 48 3099-3103 2009

  7. Oeeming, J.S., Jørgensen, M., Hansen, M.S., Petersen, E.I, , Duroux, L., and Wimmer, R. Backbone ans Sidechain 1H, 13C and 15N Resonance Assignments of the Human Brain-Type Fatty acid Binding Protein (FABP7) in its apo form and the holo forms binding to DHA, oleic acid, linoleic acid and elaidic acid Biomol NMR Assign. 3 89-93 2009

  8. Vital, P., Hosseini, M., Shanmugham, M.S., Gotfredsen, C.H., Harris, P., and Tanner, D. Polycyclic alkaloids via transannlar Mnnich reactions Chemical Communications 1888-1890 2009


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2008

  1. Büllesbach, E.E., Hass, M.A.S., Jensen, M.R., Hansen, D.F., Kristensen, S.M., Schwalbe, C., and Led, J.J. Solution Structure of a Conformationally Restricted Fully Active Deirivative of the Human Relaxin-like Factor Biochemistry 47 13308-13317 2008

  2. Hass, M.A.S., Jensen, M.R., and Led, J.J. Probing electic fields in proteins in solution by NMR spectroscopy Proteins 72 333-343 2008

  3. Pedersen, K.S., Kristensen, T.N., Loeschcke, V., Petersen, B.O., Duus, J.Ø., Nielsen, N.C., and Malmendal, A. Metabolomic Signatures of Inbreeding at Benign and Stressful Temperatures in Drosophila melanogaster Genetics 180 1233-1243 2008

  4. Pedersen, M.Ø., Underhaug, J., Dittmer, J., Miller, M., and Nielsen, N.C. The Three-dimensional structure of CsmA: A small antenna protein from the green sulfur bacterium Chlorobium tepidum FEBS Lett. 582 2869-2874 2008

  5. Petersen, B.O., Meier, S., Duus, J.Ø., and Clausen, M.H. Structural characterization of homogalacturonan by NMR spectroscopy - assignment of reference compounds Carbohydrate Research 343 2830-2833 2008

  6. Petersen, B.O., Sara, M., Mader, C., Mayer, H.F., Sleytr, U.B., Pabst, M., Puchberger, M., Krause, E., Hofinger, A., Duus, J.Ø., and Kosma, P. Structutral characterization of the acid-degraded secondary cell wall polymer of Geobacillus stearothermophilus PV72/p2 Carbohydrate Research 343 1346-1358 2008

  7. Rank, C., Phipps, R.K., Harris, P., Fristrup, P., Larsen, T.O., and Gotfredsen, C.H. Novofumigatonin, a New orthoester Meroterpenoid from Aspergillus novofumigatus Organic Lett. 10 401-404 2008

  8. Svane, A.S.P., Jahn, K., Deva, T., Malmendal, A., Otzen, D.E., Dittmer, J., and Nielsen, N.C. Early Stages of Amyloid Fibril Formation Studied by Liquid-State NMR. Ther Peptide Hormone Glucagon Biophys.J. 95 366 377 2008


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2007

  1. Bertram, H.C., Hoppe, C., Petersen, B.O., Duus, J.Ø., Mølgaard, C., and Michaelsen, K.F. An NMR-based metabonomic investigation on effects of milk and meat protein diets given to 8-year-old boys Br.J.Nutr 97 758-763 2007

  2. Bertram, H.C., Malmendal, A., Petersen, B.O., Madsen, J.C., Pedersen, H., Nielsen, N.C., Hoppe, C., Mølgaard, C., Michaelsen, K.F., and Duus, J.Ø. Effect of Magnetic Field Strength on NMR-Based Metabonomic Human Urine Data. Comparative Study of 250, 400, 500 and 800 MHz Anal.Chem. 79 7110-7115 2007

  3. Bondensgaard, K., Breinholt, J., Madsen, D., Omkvist, D.H., Kang, L., Worsaae, A., Becker, P., Schøidt, C.B., and Hjorth, S.A. The existence of Multiple Conformers of Interleukin-21 Directs Engineering of a Superpotent Analogue Journal of Biological Chemistry 282 23326-23336 2007

  4. Hass, M.A.S., Christensen, H.E.M., Zhang, J., and Led, J.J. Kinetics and Mechanism of the Acid Transition of the Active Site in Platsocyanin Biochemistry 46 14619-14628 2007

  5. Jensen, M.R., Hass, M.A.S., Hansen, D.F., and Led, J.J. Investigation metal-binding in proteins by nuclear magnetic resonance Cell.Mol.Life.Sci. 64 1085-1104 2007

  6. Skovsted, I.C., Kerrn, M.B., Sonne-Hansen, J., Sauer, L.E., Nielsen, A.K., Konradsen, A.B., Petersen, B.O., Nyberg, N.T., and Duus, J.Ø. Purification and structure characterizatiob of the active component in teh pneumococcal 22F polysaccharide capsule used for adsorption in pneumococcal enzyme-linked immunosorbent assays Vaccine 25 6490-6500 2007


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2006

  1. Benie, A.J. and Sørensen, O.W. New methods for calibration of the RF field strength for indirectly observed nuclei Journal of Magnetic Resonance 180 317-320 2006

  2. Hansen, D.F. and Led, J.J. Determination of the geometric structure of the metal site in a blue copper protein by paramagnetic NMR Proc.Nat.Acad.Sci.USA 44 1738-1743 2006

  3. Hansen, D.F., Gorelsky, S.I., Sarangi, R., Hodgson, K.O., Hedman, B., Christensen, H.E.M., Solomon, E.I., and Led, J.J. Reinvestigation of the method used to map the electronic structure of blue copper proteins by NMR relaxation J.Biol.Inorg.Chem. 11 277-285 2006

  4. Hass, M.A.S. and Led, J.J. Evaluation of two simplified 15N-NMR methods for determining mus-ms dynamics of proteins Magn.Res.Chem. 44 761-769 2006

  5. Jensen, M.R., Hansen, D.F., Ayna, U., Dagil, R., Hass, M.A.S., Christensen, H.E.M., and Led, J.J. On the use of pseudocontact shifts in the structure determination of metalloproteins Magn.Res.Chem. 44 294-301 2006

  6. Kay, W., Petersen, B.O., Duus, J.Ø., Perry, M.B., and Vinogradov, E. Characterization of the lipopolysaccharide and beta-glucan of the fish patogen Francisella victoria FEBS J. 273 3002-3013 2006

  7. Kristensen, S.M., Kasimova, M.R., and Led, J.J. The Use of NMR inthe Studies of Highly Flexible States of Proteins: Relation to Protein Function and Stability Webb,G.A. Modern Magnetic Resonance Part II 1 1 1-8 2006 Springer

  8. Omarsdottir, S., Petersen, B.O., Barsett, H., Paulsen, B.S., Duus, J.Ø., and Olafsdottir, E.S. Structural characterization of a highly branched galactomannan rom the licehn Peltigera canina by methylation analysis and NMR-spectroscopy Carbohydr.Polymers 63 54-60 2006

  9. Omarsdottir, S., Petersen, B.O., Paulsen, B.S., Togola, A., Duus, J.Ø., and Olafsdottir, E.S. Structural characterization of novel lichen heteroglycans by NMR spectroscopy and methylation analysis Carbohydrate Research 341 2449-2455 2006

  10. Petersen, B.O., Vinogradov, E., Kay, W., Würtz, P., Nyberg, N.T., Duus, J.Ø., and Sørensen, O.W. H2BC: a new technique for NMR analysis of complex carbohydrates Carbohydrate Research 341 550-556 2006

  11. Preston, A., Petersen, B.O., Duus, J.Ø., Kulber-Kleib, J., Ben-Menachem, G., Li, J., and Vinogradov, E. Complete Structures of Bordetella bronchiseptica and Bordetella parapertussis Lipopolysaccharides Journal of Biological Chemistry 281 18135-18144 2006

  12. Rank, C., Phipps, R.K., Harris, P., Frisvad, J.C., Gotfredsen, C.H., and Larsen, T.O. epi-Aszonalenins A,B, and C from Aspergillus novofumigatus Tetrahedron Lett. 47 6099-6102 2006

  13. Underhaug, J., Jakobsen, L.O., Esmann, M., Malmendal, A., and Nielsen, N.C. NMR studies of the fifth transmembrane segment of Na+,K+-ATPase reveals a non-helical ion-binding region FEBS Lett. 580 4777-4783 2006


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2005

  1. Houen, G., Struve, C., Søndergaard, R., Friis, T., Anthoni, U., Nielsen, P.H., Christoffersen, C., Petersen, B.O., and Duus, J.Ø. Substrate specificity of the bovine serum amine oxidase and in situ characterization of aminoaldehydes by NMR spectroscopy Bioorg.Med.Chem. 13 3783-3796 2005

  2. Jensen, M.R., Petersen, G., Lauritzen, C., Pedersen, J., and Led, J.J. Metal Binding Sites in Proteins: Indentification and Chracterization by Paramagnetic NMR Relaxation Biochemistry 44 11014-11023 2005

  3. Leonard, R., Petersen, B.O., Himly, M., Kaar, W., Wopfner, N., Kolarich, D., van Ree, R., Ebner, C., Duus, J.Ø., Ferreira, F., and Altmann, F. Two Novel Types of O-Glycans on the Mugwort Pollen Allergen Art v 1 and Their Role in Antibody Binding Journal of Biological Chemistry 280 7932-7940 2005

  4. Zidorn.C., Petersen, B.O., Udovicic, V., Larsen, T.O., Duus, J.Ø., Rollinger, J.M., Ongania, K.-H., Ellmerer, E.P., and Stuppner, H. Podospermic acid, 1,3,5-tri-O-(7,8-dihydrocaffeoyl)quinic acid from Podospermum lacinaitum (Asteraceae) Tetrahedron Lett. 46 1291-1294 2005


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2004

  1. Almond, A., Petersen, B.O., and Duus, J.Ø. Oligosaccharides Implicated in Recognition Are Predicted to Have Relatively Ordered Structures Biochemistry 43 5853-5863 2004

  2. Asili, J., Lambert, M., Ziegler, H.L., Stærk, D., Sairafianpour, M., Witt, M., Asghari, G., Ibrahimi, I.S., and Jaroszewski, J.W. Labdanes and Isopimaranes from Platycladus orientalis and Their Effects in Erythrocyte Membrane and on Plasmodium falciparum Growth in the Erythrocyte Host Cells J.Nat.Prod. 67 631-637 2004

  3. Bocian, W., Kawecki, R., Bednarek, E., Sitkowski, J., Peitrzyk, A., Williamson, M.P., Hansen, P.E., and Kezerski, L. Multiple Bindingg Modes of the Camphothecin Family to DNA Oligomers Chem.Eur.J. 10 5776-5787 2004

  4. Hansen, D.F. and Led, J.J. Mapping the Electronic Structure of the Blue Copper Site in Plastocyanin by NMR Relaxation Journal of the American Chemical Society 126 1247-1252 2004

  5. Hass, M.A.S., Thuesen, M.H., Christensen, H.E.M., and Led, J.J. Characterization of mus-ms Dynamics of Proteins Using a Combined Analysis of 15N NMR Relaxation and Chemical Shifts: Conformational Exchange in Plastocyanin Induced by Histidine Protonations Journal of the American Chemical Society 126 753-765 2004

  6. Jensen, M.R. and Led, J.J. Determination of the Electron Relaxation Rates in Paramagnetic Metal Complexes: Applicability of Available NMR Methods Journal of Magnetic Resonance 167 169-177 2004

  7. Nerinckx, W., Broberg, A., Duus, J.Ø., Ntarima, P., Parolis, L.A.S., Parolis, H., and Claeyssens, M. Hydrolysis of Nothogenia erinnacean xylan by xylanases from family 10 and 11 Carbohydrate Research 339 1047-1060 2004

  8. Nielsen, K.E., Rasmussen, J., Kumar, R., Wengel, J., Jacobsen, J.P., and Petersen, M. NMR Studies of fully modified locked nucleic acid (LNA) hybrids: solution structure of an LNA:RNA hybrid and characterization of an LNA:DNA hybrid Bioconjugate Chemistry 15 449-457 2004

  9. Phipps, R.K., Petersen, B.O., Christensen, K.B., Duus, J.Ø., Frisvad, J.C., and Larsen, T.O. Hesseltin A, a Novel ANtiviral Metabolite from Penicillium hesseltinei Organic Lett. 6 3441-3443 2004

  10. Stærk, D., Larsen, J., Larsen, L.A., Olafsdottir, E.S., Witt, M., and Jaroszewski, J.W. Selagoline, a new alkaloid from Huperzia selago Natural Products Research 18 197-203 2004

  11. Stærk, D., Skole, B., Jørgensen, F.S., Budnik, B.A., Ekpe, P., and Jaroszewski, J.W. Isolation of a Library of Aromadendranes from Landolphia dulcis and Its Charaterization Using the VolSurf Approach J.Nat.Prod. 67 799-805 2004

  12. Sørensen, J.J., Nielsen, J.T, and Petersen, M. Solution Structure of the dsDNA:LNA triplex Nucleic Acids Research 32 6078-6085 2004

  13. Vinogradov, E., Petersen, B.O., Duus, J.Ø., and Wasser, S. The structure of the glucuronoxylomannan produced by culinary medicinal yellow brain mushroom (Tremella mesenterica Ritz.:Fr., Heterobasidiomycetes) grown as one cell biomass in submerged culture Carbohydrate Research 339 1483-1489 2004


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2003

  1. Kasimova, M.R., Kristensen, S.M., and Led, J.J. Protein Stability versus Dynamics: A Flexible State of Human Growth Hormone Shows Surprisingly High Stability Asian Chemistry Letters 7 107-111 2003

  2. Kiselyov, V.V., Schladchikova, G., Hinsby, A.M., Jensen, P.H., Kulahin, N., Soroka, V., Pedersen, N., Tsetlin, V., Poulsen, F.M., Berezin, V., and Bock, E. Structural Basis for a Direct Interaction between FGFR1 and NCAM and Evidence for a Regulatory Role of ATP Structure 11 691-701 2003

  3. Ma, L., Hass, M.A.S., Vierick, N., Kristensen, S.M., Ulstrup, J., and Led, J.J. Backbone Dynamics of reduced Plastocyanin from the Cyanobacterium Anabaena variabilis: Regions Involved in Electron Transfer Have Enhanced Mobility Biochemistry 42 320-330 2003

  4. Nielsen, J.T, Stein, P.C., and Petersen, M. NMR structure of an alpha-L-LNA:RNA hybrid: structural implications for RNase H recognition Nucleic Acids Research 31 5858-5867 2003

  5. Nord, L.I., Sørensen, S.B., and Duus, J.Ø. Characterization of reduced iso-alpha-acids derived from hops (Humulus lupulus) by NMR Magn.Res.Chem. 41 660-670 2003

  6. Soroka, V., Kolkova, K., Kastrup, J.S., Diedrichs, K., Breed, J., Kiselyov, V.V., Poulsen, F.M., Larsen, I.K., Welte, W., Berezin, V., Bock, E., and Kasper.C. Structure and Interactions of NCAM Ig1-2-3 Suggest a Novel Zipper Mechanism for Homophilic Adhesion Structure 11 1291-1301 2003

  7. Stærk, D., Witt, M., Oketch-Rabah, H.A., and Jaroszewski, J.W. A New Class of Spermidine-Derived Alkaloids Organic Lett. 5 2793-2796 2003

  8. Tømmerholt, H.V., Christensen, N.K., Nielsen, P., Wengel, J., Stein, P.C., Jacobsen, J.P., and Petersen, M. NMR solution structure of dsDNA containing a bicyclic D-arabino-configured nucleotide fixed in an O4'-endo sugar conformation Org.Biomol.Chem. 1 1790-1797 2003

  9. Vinogradov, E., Petersen, B.O., Duus, J.Ø., and Radziejewska-Lebrecht, J. The structure of the polysaccharide part pf the LPS from Serratia marcescens serotype O19, including linkage region to the core and the residue at the non-reducing end Carbohydrate Research 338 2757-2761 2003

  10. Vinogradov, E., Petersen, B.O., Sadovskaya, I., Jabbouri, S., Duus, J.Ø., and Helander, I.M. Structure of the expectionally large nonrepetitive carbohydrate backbone of teh lipolysaccharide of Pectinatus frisingensis strain VTT E-82164 Eur.J.Biochem. 270 3036-3046 2003


[TOP]

2002

  1. Chang, X., Keller, D., O'Donoghue, S.I., and Led, J.J. NMR Studies of the aggregation of glucagon-like peptide-1: formation pf a symmetric helical dimer FEBS Lett. 515 165-170 2002

  2. Hinds, M.G., Zhang, W., Anderluh, G., Hansen, P.E., and Norton, R.S. Solution Structure of the Eukaryotic Pore-forming Cytolysin Equinatoxin II: Implications for Pore Formation J.Mol.Biol. 315 1219-1229 2002

  3. Jensen, M.R., Hansen, D.F., and Led, J.J. A General Method for Determining the electron Self-Exchange rates of Blue Copper Proteins by Longitudinal NMR Relaxation Journal of the American Chemical Society 124 4093-4096 2002

  4. Kasimova, M.R., Kristensen, S.M., Howe, P.W.A., Christensen, T., Matthiesen, F., Petersen, J., Sørensen, H.H., and Led, J.J. NMR Studies of the Backbone Flexibility and Structure of Human Growth Hormone: A Comparison of High and Low pH Conformations J.Mol.Biol. 318 679-695 2002

  5. Kjelsen, T., Ludvigsen, S., Diers, I., Balschmidt, P., Sørensen, A.R., and Kaarsholm, N.C. Engineering-enhanced Protein Secretory Expression in Yeast with Application to Insulin Journal of Biological Chemistry 277 18245-18248 2002

  6. Kosma, P., Strobl, M., Hofinger, A., Duus, J.Ø., Petersen, B.O., Bock, K., and Brade, H. Synthesis of C-8 Deuterated Glycosides of 3-Deoxy-D-manno-oct-2-ulosonic Acid (Kdo) related to Chlamydial Lipolysaccharides Chemical Monthly 133 561-570 2002

  7. Molinaro, A., De Castro, C., Lanzetta, R., Paririlli, M., Petersen, B.O., Broberg, A., and Duus, J.Ø. NMR and MS evidence for a random assembled O-specific chain structure of the LPS of the bacterium Xanthomonas campestris pv. Vitians Eur.J.Biochem. 269 4185-4193 2002

  8. Petersen, M., Bondensgaard, K., Wengel, J., and Jacobsen, J.P. Locked Nucleic Acid (LNA) Recognition of RNA: NMR Solution Structures of LNA:RNA Hybrids Journal of the American Chemical Society 124 5974-5982 2002

  9. Vinogradov, E., Frirdich, E., Maclean, L.L, Perry, M.B., Petersen, B.O., Duus, J.Ø., and Whitfield, C. Structures of Lipopolysaccharides from Klebsiella pneumoniae.ASCII13 Journal of Biological Chemistry 277 25070-25081 2002

  10. Ziegler, H.L., Stærk, D., Christensen, J., Olsen, C.A., Sittie, A.A., and Jaroszewski, J.W. New Dammarane and Malabaricane Triterpenes from Caloncoba echinata J.Nat.Prod. 65 1764-1768 2002


[TOP]

2001

  1. Almond, A. and Duus, J.Ø. Quantitative conformational analysis of the core region of N-glycans using residual couplings, aqueous molecular dynamics, and steric alignment Journal of Biomolecular NMR 20 351-363 2001

  2. Almond, A., Bunkenborg, J., Franch, T., Gotfredsen, C.H., and Duus, J.Ø. Comparison of Aqueous Molecular Dynamics with NMR Relaxation and Residual Dipolar Couplings favors Internal Motion in a Mannose Oligosaccharide Journal of the American Chemical Society 123 4792-4802 2001

  3. Chang, X., Keller, D., Bjørn, S., and Led, J.J. Structure and folding of glucagon-like peptide-1-(7-36)-amide in aqueous trifluorethanol studied by NMR Magn.Res.Chem. 39 477-483 2001

  4. Hansen, D.F. and Led, J.J. Measuring the Longitudinal NMR Relaxation Rates of Fast Relaxing Nuclei Using a Signal Eliminating Relaxation Filter Journal of Magnetic Resonance 151 339-346 2001

  5. Jensen, G.A., Singh, S.K., Kumar, R., Wengel, J., and Jacobsen, J.P. A comparison of the solution structures of an LNA:DNA duplex and the umodified DNA:DNA duplex J.Chem.Soc., Perkin Trans 2 1224-1232 2001

  6. Keller, D., Clausen, R., Josefsen, K., and Led, J.J. Flexibility and Bioactivity of Insulin: an NMR Investigation of the Solution Structure and Folding of an Unusually Flexible Human Insulin Mutant with Increased Biological Activity Biochemistry 40 10732-10740 2001

  7. Liang, X., Petersen, B.O., Duus, J.Ø., and Bols, M. A bioisosteric oligosaccharide mimetic based on isofagomine-type monomers J.Chem.Soc., Perkin Trans 1 2764-2773 2001

  8. Ludvigsen, S., Thim, L., Blom, A.M., and Wulff, B.S. Solution Structure of the Satiety Factor, CART, Reveals New Functionality of a Well-Known Fold Biochemistry 40 9082-9088 2001

  9. Ma, L., Philipp, E., and Led, J.J. Determination of the electron self-exchange rates of blue copper proteins by super-WEFT NMR spectroscopy Journal of Biomolecular NMR 19 199-208 2001

  10. Meissner, A. and Sørensen, O.W. Sequential HNCACB and CBCANH Protein NMR Pulse Sequences Journal of Magnetic Resonance 151 328-331 2001

  11. Meissner, A. and Sørensen, O.W. A Sequential HNCA NMR Pulse Sequence for Protein Backbone Assignment Journal of Magnetic Resonance 150 100-104 2001

  12. Petersen, M., Håkansson, A.E., Wengel, J., and Jacobsen, J.P. alpha-L-LNA (alpha-I-ribo Configures Locked Nucleic Acid) Recognition of RNA. A Study by NMR Spectroscopy and Molecular Dynamics Simulations Journal of the American Chemical Society 123 7431-7432 2001


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2000

  1. Bondensgaard, K., Petersen, M., Singh, S.K., Rajwanshi, V.K., Kumar, R., Wengel, J., and Jacobsen, J.P. Structural Studies of LNA:RNA Duplexes by NMR: Conformations and Implications for RNase H Activity Chem.Eur.J. 6 2687-2695 2000

  2. Bunkenborg, J., Gadjev, N.I., Deligeorgiev, T., and Jacobsen, J.P. Concerted Intercalation and Minor Groove Recognition of DNA by a Homodimeric Thiazole Orange Dye Bioconjugate Chemistry 11 861-867 2000

  3. Duus, J.Ø., Gotfredsen, C.H., and Bock, K. Carbohydrate Structural Determination by NMR Spectroscopy: Modern Methods and Limitations Chem.Rev. 100 4589-4614 2000

  4. Gotfredsen, C.H., Viswanadham, G., Jørgensen, P.N., Wengel, J., and Jacobsen, J.P. NMR structure of a DNA duplex containing the modified nucleotide 3'-C-(hydroxymethyl)thymidine Asian Chemistry Letters 4 171-184 2000

  5. Heydorn, A., Petersen, B.O., Duus, J.Ø., Bergmann, S., Suhr-Jessen, T., and Nielsen, J. Biosynthetic Studies of the Glycopeptide Teicoplanin by 1H and 13C NMR Journal of Biological Chemistry 275 6201-6206 2000

  6. Jørgensen, L.B., Nielsen, P., Wengel, J., and Jacobsen, J.P. The Solution Structure of a DNA Duplex Containing a Single 1-(2-O,3-C-Ethylene-beta-D-Arabinofuranosyl)thymidine Nucleoside Journal of Biomolecular Structure & Dynamics 18 45-57 2000

  7. Ma, L. and Led, J.J. Determination by High Field NMR Spectroscopy of the Longitudinal Electron Relaxation Rate in Cu(II) Plastocyanin from Anabaena variabilis Journal of the American Chemical Society 122 7823-7824 2000

  8. Ma, L., Jørgensen, A.M.M., Sørensen, G.O., Ulstrup, J., and Led, J.J. Elucidation of the Paramagnetic R1 Relaxation of Heteronuclei and Protons in Cu(II) Plastocyanin from Anabena variabilis Journal of the American Chemical Society 122 9473-9485 2000

  9. Meissner, A. and Sørensen, O.W. Suppression of Diagonal Peaks in Three-Dimensional Protein NMR TROSY-Type HCCH Correlation Experiments Journal of Magnetic Resonance 144 171-174 2000

  10. Meissner, A. and Sørensen, O.W. New Techniques for the Measurement of C'N and C'HN J Coupling Constants across Hydrogen Bonds in Proteins Journal of Magnetic Resonance 143 387-390 2000

  11. Meissner, A. and Sørensen, O.W. 3hJ Coupling between Calpha and HN across Hydrogen Bonds in Proteins Journal of Magnetic Resonance 143 431-434 2000

  12. Molinaro, A., De Castro, C., Petersen, B.O., Duus, J.Ø., Paririlli, M., and Holst, O. Acetyl Substitution of the O-Specific Caryan from the Lipopolysaccharide of Pseudomonas (Burkholderia) caryophylli Leads to a Block Pattern Angew.Chem.Int.Ed. 39 156-160 2000

  13. Nielsen, K.E., Singh, S.K., Wengel, J., and Jacobsen, J.P. Solution Structure of an LNA Hybridized to DNA: NMR Study of the d(CTLGCTLTLCTLGC):d(GCAGAAGCAG) Duplex Containing Four Locked Nucleotides Bioconjugate Chemistry 11 228-238 2000

  14. Nørrevang, M.B., Abildgaard, F., Kristensen, S.M., and Led, J.J. Solution Conformation of the Insulin B-chain Fragment B23-B29 Asian Chemistry Letters 4 159-170 2000

  15. O'Donoghue, S.I., Chang, X., Abseher, R., Nilges, M., and Led, J.J. Unraveling the symmetry ambiguity in a hexamer: Calculation of the R6 human insulin structure Journal of Biomolecular NMR 16 93-108 2000

  16. Olsthoorn, M.M.A., Petersen, B.O., Duus, J., Haverkamp, J., Thomas-Oates, J.E., Bock, K., and Holst, O. The structure of the linkage between the O-specific polysaccharide and the core region of the lipopolysaccharide from Salmonella enterica serovar Typhimurium revisited Eur.J.Biochem. 267 2014-2027 2000

  17. Petersen, B.O., Krah, M., Duus, J.Ø., and Thomsen, K.K. A transglycosylating 1,3(4)-beta-glucanase from Rhodothermus marinus. NMR analysis of enzyme reactions Eur.J.Biochem. 267 361-369 2000

  18. Petersen, M., Nielsen, C.B., Nielsen, K.E., Jensen, G.A., Bondensgaard, K., Singh, S.K., Rajwanshi, V.K., Koshkin, A.A., Dahl, B.M., Wengel, J., and Jacobsen, J.P. The conformation of locked nucleic Acids (LNA) J.Mol.Recogn. 13 44-53 2000

  19. Stærk, D., Christensen, J., Lemmich, E., Duus, J.Ø., Olsen, C.A., and Jaroszewski, J.W. Cytotoxic Activity of Some Phenanthroindolizidine N-Oxide Alkaloids from Cynanchum vincetoxicum J.Nat.Prod. 63 1584-1586 2000

  20. Vinogradov, E., Petersen, B.O., and Duus, J.Ø. Isolation and characterization of non-labeled and 13C-labeled mannans from Pichia pastoris yeast Carbohydrate Research 325 216-221 2000

  21. Zhang, W., Hinds, M.G., Anderluh, G., Hansen, P.E., and Norton, R.S. Letter to the Editor: Sequence-specific resonance assignment of the potent cytolysin equinatoxin II Journal of Biomolecular NMR 18 281-282 2000


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1999

  1. Bondensgaard, K. and Jacobsen, J.P. Solution Structure and Energy Calculation of Bis-Intercalation of Homodimeric Thiazole Orange Dye derivatives in DNA: Effects of Modifying the Linker Bioconjugate Chemistry 10 735-744 1999

  2. Jensen, P.H., Soroka, V., Thomsen, N.K., Ralets, I., Berezin, V., Bock, E., and Poulsen, F.M. Structure and interactions of NCAM modules 1 and 2, basic elements in neural cell adhesion Nature Structural Biology 6 486-493 1999

  3. Lerche, M.H., Meissner, A., Poulsen, F.M., and Sørensen, O.W. Pulse Sequences for Measurement of One-Bond 15N-1H Coupling Constants in the Protein Backbone Journal of Magnetic Resonance 140 259-263 1999

  4. Meissner, A. and Sørensen, O.W. Suppression of Diagonal Peaks in TROSY-Type 1H NMR NOESY Spectra of 15N-Labelled Proteins Journal of Magnetic Resonance 140 499-503 1999

  5. Meissner, A. and Sørensen, O.W. The Role of Coherence Transfer Efficiency in Design of TROSY-Type Multidimensional NMR Experiments Journal of Magnetic Resonance 139 439-442 1999

  6. Meissner, A. and Sørensen, O.W. Optimization of Three-Dimensional TROSY-Type HCCH NMR Correlation of Aromatic 1H-13C Groups in Proteins Journal of Magnetic Resonance 139 447-450 1999

  7. Nielsen, C.B., Singh, S.K., Wengel, J., and Jacobsen, J.P. The Solution Structure of a Locked Nucleic Acid (LNA) Hybridized to DNA Journal of Biomolecular Structure & Dynamics 17 175-191 1999

  8. Petersen, M., Hamed, A.A., Pedersen, E.B., and Jacobsen, J.P. Bis-intercalation of Homodimeric Thiazole Orange Dye Derivatives Bioconjugate Chemistry 10 66-74 1999

  9. Rønn, L.C.B., Olsen, M., Østergaard, S., Kiselyov, V., Berezin, V., Mortensen, M.T., Lerche, M.H., Jensen, P.H., Soroka, V., Saffells, J.L., Doherty, P., Poulsen, F.M., Bock, E., and Holm, A. Identification of a neuritogenic ligand of the neural cell adhesion molecule using a combinatorial library of synthetic peptides Nature Biotechnology 17 1000-1005 1999

  10. Schmidt, K., Nørregaard, L.C., Pedersen, B., Meissner, A., Duus, J.Ø., Nielsen, J., and Villadsen, J. Quantification of Intracellular Metabolic Fluxes from Fractional Enrichment and 13C-13C Coupling Constraints on the Isotopomer Distribution in Labeled Biomass Components Metabolic Engineering 1 166-179 1999

  11. Sørensen, M.D., Meissner, A., and Sørensen, O.W. 13C Natural Abundance S3E and S3CT Experiments for Measurement of J Coupling Constants between 13Calpha or1Halpha and Other Protons in a Protein Journal of Magnetic Resonance 137 237-242 1999


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1998

  1. Jensen, P.H., Thomsen, N.K., Soroka, V., Berezin, V., Bock, E., and Poulsen, F.M. 1H and 15N assigment of neural cell adhesion module-2 Journal of Biomolecular NMR 12 569-570 1998

  2. Johansen, F. and Jacobsen, J.P. 1H NMR Studies of the Bis-Intercalcation of a Homodimeric Oxazole Yellow Dye in DNA Oligonucleotides Journal of Biomolecular Structure & Dynamics 16 205-222 1998

  3. Leslei, M.R., Parolis, H., Parolis, L.A.S., and Petersen, B.O. The capsular antigen of Escherichia coli O9:K33:H-: a polysaccharide containing both pyrovate and O-acetyl groups Carbohydrate Research 309 95-101 1998

  4. Meissner, A. and Sørensen, O.W. New Multidimensional Editing Experiments for Measurement of Amide Deuterium Isotope Effects on Cbeta Chemical Shifts in 13C, 15N-Labeled Proteins Journal of Magnetic Resonance 135 547-550 1998

  5. Meissner, A., Briand, J., and Sørensen, O.W. Editing of multidimensional NMR spectra of partially deuterated proteins. Measurement of amide deuterium isotope effects on chemical shifts of protein backbone nuclei Journal of Biomolecular NMR 12 339-343 1998

  6. Meissner, A., Schulte-Herbrüggen, T., and Sørensen, O.W. Relaxation Artifacts and Their Suppression in Multidimensional E.COSY-type NMR Experiments for Measurement of J Coupling Constants in 13C- or15N-Labeled Proteins Journal of the American Chemical Society 120 7989-7990 1998

  7. Meissner, A., Schulte-Herbrüggen, T., Briand, J., and Sørensen, O.W. Double spin-state-selective coherence transfer. Application for two-dimensional selection of multiplet components with long transverse relaxation times. Molecular Physics 95 1137-1142 1998

  8. Olsthoorn, M.M.A., López-Lara, I.M, Petersen, B.O., Bock, K., Haverkamp, J., Spaink, H.P., and Thomas-Oates, J.E. Novel Branched Nod Factor Structure Results from alpha-(1-3) Fucosyl Transferase Activity: The Major Lipo-Chitin Oligosaccharides from Mesorhizobium loti Strain NZP2213 Bear an alpha-(1-3) Fucosyl Substituent on a Nonterminal Backbone Residue Biochemistry 37 9024-9032 1998

  9. Sergeyeva, N.D., Jacobsen, J.P., and Sergeyev, N.M The 18O/16O induced proton isotope shift in water Chemical Communications 1355-1356 1998

  10. Somanadhan, B., Smitt, U.W., George, V:, Pushpangadan, P., Rajasekharan, S., Duus, J.Ø., Nyman, .U., Olsen, C.A., and Jaroszewski, J.W. Angiotensin Converting Enzyme (ACE) Inhibitors from Jasminium azoricum and Jasminium grandiflorum Planta Medica 64 246-250 1998

  11. Vinogradov, E., Petersen, B., and Bock, K. Structural analysis of the intact polysaccharide mannan from Saccharomyces cerevisiae yeast using 1H and 13C NMR spectroscopy at 750 MHz Carbohydrate Research 307 177-183 1998

  12. Vinogradov, E.V., Petersen, B.O., Thomas-Oates, J.E., Duus, J.Ø., Brade, H., and Holst, O. Characterization of a Novel Branched Tetrasaccharide of 3-Deoxy-D-manno-oct-2-ulopyranosonic Acid. The Structure of the Carbohydrate Backbone of the Lipopolysaccharide from Acinetobacter Baumani Strain NCTC 10303 (ATCC 17904) Journal of Biological Chemistry 273 28122-28131 1998


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1997

  1. Chang, X., Jørgensen, A.M.M., Bardrum, .P., and Led, J.J. Solution Structures of the R6 Human Insulin Hexamer Biochemistry 36 9409-9422 1997

  2. Meissner, A., Duus, J.Ø., and Sørensen, O.W. Spin-State-Selective Excitation. Application for E.COSY-Type Measurement of JHH Coupling Constants Journal of Magnetic Resonance 128 92-97 1997

  3. Meissner, A., Duus, J.Ø., and Sørensen, O.W. Integration of spin-state-selective excitation into 2D NMR correlation experiments with heteronuclear ZQ/2Q pi rotations for 1JXH-resolved E.COSY-type measurements of heteronuclear coupling constants in proteins Journal of Biomolecular NMR 10 89-94 1997

  4. Sørensen, M.D., Meissner, A., and Sørensen, O.W. Spin-State-Selective coherence transfer via intermediate states of two-spin coherence in IS spin systems: Application to E.COSY-type measurement of J coupling constants Journal of Biomolecular NMR 10 181-186 1997


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