Carlsberg Research Center
NMR center
Pulse sequence library
Coupling Constants in Proteins
TROSY Experiments
Hydrogen Bond Experiments
Small Molecules
Pulse Calibration
Disclaimer
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H2BC for Bruker
Pulse programs
- H2BC with second order low-pass J filter (XWinNMR 2.6+):
h2bc_cteal2
- H2BC with third order low-pass J filter (XWinNMR 2.6+):
h2bc_cteal3
- H2BC with second or third order low-pass J filter and multiplicity editing
(TopSpin 1.3):
h2bc_two
Procedure for h2bc_two
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Start with a HSQC parameterset rpar HSQCETGP all
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Change pulse program to
h2bc_two
pulprog h2bc_two
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Set up the acquisition parameters
ased
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Set
cnst6 to 125 Hz, cnst8 to 165 Hz and
cnst15 to 20 ms.
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For a standard H2BC-experiment: set the
ZGOPTNS
to -DSUB and L31 to 0
ZGOPTNS -DSUB; l31 0
If this is not done two experiments will be acquired
in interleaved mode for multiplicity editing and this will
require som extra processing steps. Please see the procedure for
edited h2bc.
This point can be skipped for the pulse programs
h2bc_cteal2 and h2bc_cteal3.
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Adjust
sw and/or cnst15 until
the calculated parameter TD1MAX is less or equal
to the current td1
(= number of increments of t1 × 2)
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Make sure the power for the decoupling schemes is suitable for
your system.
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Set the number of scans to ~ 4× that of a decent HSQC
on the same sample. Keep the same receiver gain.
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Start the experiment and keep an eye on the amplifiers and
temperature of the sample.
Processing
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Do two-dimesional Fourier transform
XFB
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Phase the signals to either pure absorption
or pure dispersion.
Weak signals will benefit from the latter.
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Cross peaks generally correlates protons with
carbons two bonds away.
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